Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.94□□□□□ -0.34
Hoxa4P06798 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxa4P06798 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxa4P06798 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Hoxa4P06798 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.93□□□□□ -0.34
Hoxa4P06798 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Hoxa4P06798 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Hoxa4P06798 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.93□□□□□ -0.34
Hoxa4P06798 Gm12291-201ENSMUST00000121627 311 ntBASIC12.93□□□□□ -0.34
Hoxa4P06798 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.93□□□□□ -0.34
Hoxa4P06798 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.93□□□□□ -0.34
Hoxa4P06798 Gm26185-201ENSMUST00000157692 266 ntBASIC12.93□□□□□ -0.34
Hoxa4P06798 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.93□□□□□ -0.34
Hoxa4P06798 Gm19163-201ENSMUST00000223313 780 ntBASIC12.93□□□□□ -0.34
Hoxa4P06798 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Hoxa4P06798 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hoxa4P06798 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.93□□□□□ -0.34
Hoxa4P06798 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxa4P06798 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.93□□□□□ -0.34
Hoxa4P06798 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Gm22121-201ENSMUST00000175148 54 ntBASIC12.92□□□□□ -0.34
Hoxa4P06798 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.92□□□□□ -0.34
Hoxa4P06798 AY702102-202ENSMUST00000194651 1173 ntBASIC12.92□□□□□ -0.34
Hoxa4P06798 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.92□□□□□ -0.34
Hoxa4P06798 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxa4P06798 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxa4P06798 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxa4P06798 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxa4P06798 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms