Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Gm14350-201ENSMUST00000116642 640 ntBASIC12.61□□□□□ -0.39
P04213 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.61□□□□□ -0.39
P04213 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.61□□□□□ -0.39
P04213 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.61□□□□□ -0.39
P04213 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.61□□□□□ -0.39
P04213 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
P04213 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
P04213 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
P04213 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.61□□□□□ -0.39
P04213 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.61□□□□□ -0.39
P04213 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
P04213 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04213 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
P04213 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
P04213 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.6□□□□□ -0.39
P04213 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.6□□□□□ -0.39
P04213 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.6□□□□□ -0.39
P04213 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Mir6977-201ENSMUST00000184960 64 ntBASIC12.6□□□□□ -0.39
P04213 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.6□□□□□ -0.39
P04213 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.6□□□□□ -0.39
P04213 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.6□□□□□ -0.39
P04213 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
P04213 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P04213 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
P04213 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.6□□□□□ -0.39
P04213 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04213 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
P04213 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P04213 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
P04213 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.59□□□□□ -0.39
P04213 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
P04213 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P04213 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.59□□□□□ -0.39
P04213 Gm11978-201ENSMUST00000122315 466 ntBASIC12.59□□□□□ -0.39
P04213 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P04213 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.59□□□□□ -0.39
P04213 Gm15429-201ENSMUST00000151268 798 ntBASIC12.59□□□□□ -0.39
P04213 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Gm44397-201ENSMUST00000195950 113 ntBASIC12.59□□□□□ -0.39
P04213 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.59□□□□□ -0.39
P04213 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.59□□□□□ -0.39
P04213 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.59□□□□□ -0.39
P04213 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04213 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
P04213 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.59□□□□□ -0.39
P04213 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms