Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxa3P02831 Gm16177-201ENSMUST00000120728 718 ntBASIC11.05□□□□□ -0.64
Hoxa3P02831 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.05□□□□□ -0.64
Hoxa3P02831 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxa3P02831 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.05□□□□□ -0.64
Hoxa3P02831 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.05□□□□□ -0.64
Hoxa3P02831 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.05□□□□□ -0.64
Hoxa3P02831 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Hoxa3P02831 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxa3P02831 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.05□□□□□ -0.64
Hoxa3P02831 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxa3P02831 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.05□□□□□ -0.64
Hoxa3P02831 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxa3P02831 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.04□□□□□ -0.64
Hoxa3P02831 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Gm23931-201ENSMUST00000103842 109 ntBASIC11.04□□□□□ -0.64
Hoxa3P02831 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Gm8213-201ENSMUST00000118191 441 ntBASIC11.04□□□□□ -0.64
Hoxa3P02831 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Gm27331-201ENSMUST00000183705 60 ntBASIC11.04□□□□□ -0.64
Hoxa3P02831 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Gm37424-201ENSMUST00000191727 561 ntBASIC11.04□□□□□ -0.64
Hoxa3P02831 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.04□□□□□ -0.64
Hoxa3P02831 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Hoxa3P02831 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.04□□□□□ -0.64
Hoxa3P02831 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hoxa3P02831 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxa3P02831 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hoxa3P02831 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hoxa3P02831 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxa3P02831 Gm12742-201ENSMUST00000117326 410 ntBASIC11.03□□□□□ -0.64
Hoxa3P02831 Gm13392-201ENSMUST00000117708 150 ntBASIC11.03□□□□□ -0.64
Hoxa3P02831 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Hoxa3P02831 Gm8062-201ENSMUST00000139696 444 ntBASIC11.03□□□□□ -0.64
Hoxa3P02831 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.03□□□□□ -0.64
Hoxa3P02831 Snora78-201ENSMUST00000158630 128 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms