Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sp1O89090 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.25□□□□□ -0.29
Sp1O89090 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sp1O89090 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sp1O89090 Gm11793-201ENSMUST00000120433 981 ntBASIC13.25□□□□□ -0.29
Sp1O89090 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Sp1O89090 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.25□□□□□ -0.29
Sp1O89090 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.25□□□□□ -0.29
Sp1O89090 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.25□□□□□ -0.29
Sp1O89090 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sp1O89090 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.25□□□□□ -0.29
Sp1O89090 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Sp1O89090 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp1O89090 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Sp1O89090 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
Sp1O89090 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Sp1O89090 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.24□□□□□ -0.29
Sp1O89090 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Gm14704-201ENSMUST00000120300 874 ntBASIC13.24□□□□□ -0.29
Sp1O89090 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.24□□□□□ -0.29
Sp1O89090 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.24□□□□□ -0.29
Sp1O89090 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Gm27501-201ENSMUST00000183599 107 ntBASIC13.24□□□□□ -0.29
Sp1O89090 Gm38158-201ENSMUST00000194617 339 ntBASIC13.24□□□□□ -0.29
Sp1O89090 Gm42627-201ENSMUST00000197347 224 ntBASIC13.24□□□□□ -0.29
Sp1O89090 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.24□□□□□ -0.29
Sp1O89090 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sp1O89090 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sp1O89090 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.24□□□□□ -0.29
Sp1O89090 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.24□□□□□ -0.29
Sp1O89090 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp1O89090 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sp1O89090 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sp1O89090 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sp1O89090 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.23□□□□□ -0.29
Sp1O89090 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Sp1O89090 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.23□□□□□ -0.29
Sp1O89090 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.23□□□□□ -0.29
Sp1O89090 Mir8109-201ENSMUST00000184375 117 ntBASIC13.23□□□□□ -0.29
Sp1O89090 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Gm18584-201ENSMUST00000203098 964 ntBASIC13.23□□□□□ -0.29
Sp1O89090 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.23□□□□□ -0.29
Sp1O89090 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp1O89090 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms