Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopeO89079 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CopeO89079 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CopeO89079 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CopeO89079 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
CopeO89079 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.57□□□□□ -0.24
CopeO89079 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
CopeO89079 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.57□□□□□ -0.24
CopeO89079 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.57□□□□□ -0.24
CopeO89079 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.57□□□□□ -0.24
CopeO89079 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.57□□□□□ -0.24
CopeO89079 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CopeO89079 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.57□□□□□ -0.24
CopeO89079 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.57□□□□□ -0.24
CopeO89079 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.57□□□□□ -0.24
CopeO89079 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CopeO89079 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CopeO89079 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.56□□□□□ -0.24
CopeO89079 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CopeO89079 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.56□□□□□ -0.24
CopeO89079 Gm38294-201ENSMUST00000192831 381 ntBASIC13.56□□□□□ -0.24
CopeO89079 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.56□□□□□ -0.24
CopeO89079 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.56□□□□□ -0.24
CopeO89079 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Gm8396-201ENSMUST00000057361 823 ntBASIC13.56□□□□□ -0.24
CopeO89079 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Gm5161-201ENSMUST00000075243 853 ntBASIC13.56□□□□□ -0.24
CopeO89079 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.56□□□□□ -0.24
CopeO89079 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.56□□□□□ -0.24
CopeO89079 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CopeO89079 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.56□□□□□ -0.24
CopeO89079 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.56□□□□□ -0.24
CopeO89079 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.56□□□□□ -0.24
CopeO89079 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.56□□□□□ -0.24
CopeO89079 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CopeO89079 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CopeO89079 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CopeO89079 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.55□□□□□ -0.24
CopeO89079 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CopeO89079 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
CopeO89079 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.55□□□□□ -0.24
CopeO89079 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.55□□□□□ -0.24
CopeO89079 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Gm4875-201ENSMUST00000118257 786 ntBASIC13.55□□□□□ -0.24
CopeO89079 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.55□□□□□ -0.24
CopeO89079 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Gm17837-201ENSMUST00000186435 985 ntBASIC13.55□□□□□ -0.24
CopeO89079 Gm38144-201ENSMUST00000192790 465 ntBASIC13.55□□□□□ -0.24
CopeO89079 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms