Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.52□□□□□ -0.25
Syn1O88935 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.52□□□□□ -0.25
Syn1O88935 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.52□□□□□ -0.25
Syn1O88935 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.52□□□□□ -0.25
Syn1O88935 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.52□□□□□ -0.25
Syn1O88935 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syn1O88935 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Syn1O88935 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.51□□□□□ -0.25
Syn1O88935 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Gm14109-201ENSMUST00000118814 309 ntBASIC13.51□□□□□ -0.25
Syn1O88935 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.51□□□□□ -0.25
Syn1O88935 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.51□□□□□ -0.25
Syn1O88935 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Syn1O88935 Mir6958-201ENSMUST00000184207 73 ntBASIC13.51□□□□□ -0.25
Syn1O88935 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.51□□□□□ -0.25
Syn1O88935 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Spcs1-203ENSMUST00000226374 592 ntBASIC13.51□□□□□ -0.25
Syn1O88935 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Syn1O88935 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syn1O88935 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Syn1O88935 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
Syn1O88935 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.5□□□□□ -0.25
Syn1O88935 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.5□□□□□ -0.25
Syn1O88935 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.5□□□□□ -0.25
Syn1O88935 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Syn1O88935 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Syn1O88935 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.5□□□□□ -0.25
Syn1O88935 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Syn1O88935 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.5□□□□□ -0.25
Syn1O88935 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.5□□□□□ -0.25
Syn1O88935 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.5□□□□□ -0.25
Syn1O88935 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.5□□□□□ -0.25
Syn1O88935 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.5□□□□□ -0.25
Syn1O88935 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Syn1O88935 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.5□□□□□ -0.25
Syn1O88935 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syn1O88935 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms