Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.74□□□□□ -0.53
CcnkO88874 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.74□□□□□ -0.53
CcnkO88874 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.74□□□□□ -0.53
CcnkO88874 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CcnkO88874 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CcnkO88874 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CcnkO88874 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CcnkO88874 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Gm13453-201ENSMUST00000118708 357 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Gm13616-201ENSMUST00000120600 222 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CcnkO88874 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CcnkO88874 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CcnkO88874 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.73□□□□□ -0.53
CcnkO88874 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.73□□□□□ -0.53
CcnkO88874 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CcnkO88874 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.73□□□□□ -0.53
CcnkO88874 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CcnkO88874 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CcnkO88874 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.73□□□□□ -0.53
CcnkO88874 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
CcnkO88874 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CcnkO88874 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CcnkO88874 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.73□□□□□ -0.53
CcnkO88874 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.72□□□□□ -0.53
CcnkO88874 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Mir698-201ENSMUST00000102164 109 ntBASIC11.72□□□□□ -0.53
CcnkO88874 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Gm15393-201ENSMUST00000120499 219 ntBASIC11.72□□□□□ -0.53
CcnkO88874 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Gm3436-201ENSMUST00000179930 840 ntBASIC11.72□□□□□ -0.53
CcnkO88874 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Gm44344-201ENSMUST00000200287 129 ntBASIC11.72□□□□□ -0.53
CcnkO88874 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.72□□□□□ -0.53
CcnkO88874 Gm6888-201ENSMUST00000221983 706 ntBASIC11.72□□□□□ -0.53
CcnkO88874 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.72□□□□□ -0.53
CcnkO88874 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CcnkO88874 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CcnkO88874 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms