Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ClppO88696 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
ClppO88696 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Gm29127-201ENSMUST00000188304 517 ntBASIC12.9□□□□□ -0.34
ClppO88696 Gm17330-201ENSMUST00000221047 165 ntBASIC12.9□□□□□ -0.34
ClppO88696 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ClppO88696 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.9□□□□□ -0.34
ClppO88696 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ClppO88696 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.9□□□□□ -0.34
ClppO88696 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.9□□□□□ -0.34
ClppO88696 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ClppO88696 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.9□□□□□ -0.34
ClppO88696 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.89□□□□□ -0.35
ClppO88696 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ClppO88696 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.89□□□□□ -0.35
ClppO88696 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.89□□□□□ -0.35
ClppO88696 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.89□□□□□ -0.35
ClppO88696 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.89□□□□□ -0.35
ClppO88696 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.89□□□□□ -0.35
ClppO88696 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.89□□□□□ -0.35
ClppO88696 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ClppO88696 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ClppO88696 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ClppO88696 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ClppO88696 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
ClppO88696 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.89□□□□□ -0.35
ClppO88696 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.89□□□□□ -0.35
ClppO88696 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.89□□□□□ -0.35
ClppO88696 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.89□□□□□ -0.35
ClppO88696 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ClppO88696 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClppO88696 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ClppO88696 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.88□□□□□ -0.35
ClppO88696 Gm8213-201ENSMUST00000118191 441 ntBASIC12.88□□□□□ -0.35
ClppO88696 Gm5687-201ENSMUST00000118252 640 ntBASIC12.88□□□□□ -0.35
ClppO88696 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.88□□□□□ -0.35
ClppO88696 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.88□□□□□ -0.35
ClppO88696 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ClppO88696 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
ClppO88696 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Gm2445-201ENSMUST00000182798 989 ntBASIC12.88□□□□□ -0.35
ClppO88696 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.88□□□□□ -0.35
ClppO88696 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.88□□□□□ -0.35
ClppO88696 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.88□□□□□ -0.35
ClppO88696 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.88□□□□□ -0.35
ClppO88696 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Gm6091-201ENSMUST00000098307 165 ntBASIC12.88□□□□□ -0.35
ClppO88696 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.88□□□□□ -0.35
ClppO88696 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms