Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ttc3O88196 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ttc3O88196 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ttc3O88196 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ttc3O88196 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ttc3O88196 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Gm8099-201ENSMUST00000200510 742 ntBASIC13.67□□□□□ -0.22
Ttc3O88196 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.67□□□□□ -0.22
Ttc3O88196 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ttc3O88196 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Ttc3O88196 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.67□□□□□ -0.22
Ttc3O88196 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ttc3O88196 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ttc3O88196 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ttc3O88196 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.67□□□□□ -0.22
Ttc3O88196 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ttc3O88196 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.67□□□□□ -0.22
Ttc3O88196 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ttc3O88196 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ttc3O88196 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ttc3O88196 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.67□□□□□ -0.22
Ttc3O88196 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ttc3O88196 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.67□□□□□ -0.22
Ttc3O88196 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.66□□□□□ -0.22
Ttc3O88196 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ttc3O88196 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.66□□□□□ -0.22
Ttc3O88196 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Gm13736-201ENSMUST00000119272 253 ntBASIC13.66□□□□□ -0.22
Ttc3O88196 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.66□□□□□ -0.22
Ttc3O88196 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.66□□□□□ -0.22
Ttc3O88196 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Ttc3O88196 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ttc3O88196 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ttc3O88196 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ttc3O88196 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ttc3O88196 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ttc3O88196 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ttc3O88196 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.65□□□□□ -0.22
Ttc3O88196 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.65□□□□□ -0.22
Ttc3O88196 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.65□□□□□ -0.22
Ttc3O88196 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ttc3O88196 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ttc3O88196 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ttc3O88196 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms