Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ubr1O70481 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ubr1O70481 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.73■□□□□ 0.27
Ubr1O70481 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ubr1O70481 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.73■□□□□ 0.27
Ubr1O70481 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Gm45598-202ENSMUST00000210719 986 ntBASIC16.73■□□□□ 0.27
Ubr1O70481 Gm8959-201ENSMUST00000213150 571 ntBASIC16.73■□□□□ 0.27
Ubr1O70481 Gm5369-201ENSMUST00000217499 588 ntBASIC16.73■□□□□ 0.27
Ubr1O70481 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.73■□□□□ 0.27
Ubr1O70481 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ubr1O70481 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ubr1O70481 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubr1O70481 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Ubr1O70481 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.72■□□□□ 0.27
Ubr1O70481 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.72■□□□□ 0.27
Ubr1O70481 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Ubr1O70481 Gm28882-201ENSMUST00000185504 314 ntBASIC16.72■□□□□ 0.27
Ubr1O70481 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.72■□□□□ 0.27
Ubr1O70481 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.72■□□□□ 0.27
Ubr1O70481 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.72■□□□□ 0.27
Ubr1O70481 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ubr1O70481 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ubr1O70481 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Ubr1O70481 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ubr1O70481 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.72■□□□□ 0.27
Ubr1O70481 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Ubr1O70481 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubr1O70481 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC16.72■□□□□ 0.27
Ubr1O70481 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.71■□□□□ 0.27
Ubr1O70481 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ubr1O70481 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.71■□□□□ 0.27
Ubr1O70481 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC16.71■□□□□ 0.27
Ubr1O70481 Rmrp-201ENSMUST00000157463 271 ntBASIC16.71■□□□□ 0.27
Ubr1O70481 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Ubr1O70481 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.71■□□□□ 0.27
Ubr1O70481 Gm37986-201ENSMUST00000193285 383 ntBASIC16.71■□□□□ 0.27
Ubr1O70481 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Ubr1O70481 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Gm18393-201ENSMUST00000208349 1131 ntBASIC16.71■□□□□ 0.27
Ubr1O70481 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.71■□□□□ 0.27
Ubr1O70481 Gm10076-201ENSMUST00000073238 384 ntBASIC16.71■□□□□ 0.27
Ubr1O70481 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.71■□□□□ 0.27
Ubr1O70481 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.71■□□□□ 0.27
Ubr1O70481 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ubr1O70481 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ubr1O70481 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.71■□□□□ 0.26
Ubr1O70481 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ubr1O70481 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.71■□□□□ 0.26
Ubr1O70481 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ubr1O70481 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ubr1O70481 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms