Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.64■□□□□ 0.09
Smarce1O54941 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarce1O54941 Gm29608-201ENSMUST00000190444 463 ntBASIC15.64■□□□□ 0.09
Smarce1O54941 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.64■□□□□ 0.09
Smarce1O54941 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.64■□□□□ 0.09
Smarce1O54941 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Smarce1O54941 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Smarce1O54941 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.64■□□□□ 0.09
Smarce1O54941 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Smarce1O54941 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarce1O54941 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Smarce1O54941 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Smarce1O54941 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smarce1O54941 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.63■□□□□ 0.09
Smarce1O54941 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.63■□□□□ 0.09
Smarce1O54941 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
Smarce1O54941 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smarce1O54941 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Mir7684-201ENSMUST00000183858 60 ntBASIC15.63■□□□□ 0.09
Smarce1O54941 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.63■□□□□ 0.09
Smarce1O54941 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.63■□□□□ 0.09
Smarce1O54941 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarce1O54941 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Smarce1O54941 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Smarce1O54941 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Smarce1O54941 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.62■□□□□ 0.09
Smarce1O54941 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.62■□□□□ 0.09
Smarce1O54941 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.62■□□□□ 0.09
Smarce1O54941 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Smarce1O54941 Gm27989-201ENSMUST00000184721 107 ntBASIC15.62■□□□□ 0.09
Smarce1O54941 Gm42550-201ENSMUST00000201553 960 ntBASIC15.62■□□□□ 0.09
Smarce1O54941 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.62■□□□□ 0.09
Smarce1O54941 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarce1O54941 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.62■□□□□ 0.09
Smarce1O54941 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarce1O54941 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarce1O54941 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarce1O54941 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarce1O54941 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.61■□□□□ 0.09
Smarce1O54941 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarce1O54941 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Smarce1O54941 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms