Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Npc1O35604 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Npc1O35604 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.85□□□□□ -0.35
Npc1O35604 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.85□□□□□ -0.35
Npc1O35604 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.85□□□□□ -0.35
Npc1O35604 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Npc1O35604 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.85□□□□□ -0.35
Npc1O35604 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Npc1O35604 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Npc1O35604 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Npc1O35604 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.85□□□□□ -0.35
Npc1O35604 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npc1O35604 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.85□□□□□ -0.35
Npc1O35604 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.84□□□□□ -0.35
Npc1O35604 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Npc1O35604 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Npc1O35604 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Npc1O35604 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Npc1O35604 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.84□□□□□ -0.35
Npc1O35604 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.84□□□□□ -0.35
Npc1O35604 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Npc1O35604 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.84□□□□□ -0.35
Npc1O35604 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Npc1O35604 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Npc1O35604 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Gm6091-201ENSMUST00000098307 165 ntBASIC12.84□□□□□ -0.35
Npc1O35604 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npc1O35604 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Npc1O35604 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Npc1O35604 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Npc1O35604 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.83□□□□□ -0.36
Npc1O35604 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Npc1O35604 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Npc1O35604 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Gm29127-201ENSMUST00000188304 517 ntBASIC12.83□□□□□ -0.36
Npc1O35604 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.83□□□□□ -0.36
Npc1O35604 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Npc1O35604 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms