Protein–RNA interactions for Protein: O35280

Chek1, Serine/threonine-protein kinase Chk1, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chek1O35280 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Chek1O35280 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Chek1O35280 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.68□□□□□ -0.7
Chek1O35280 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.68□□□□□ -0.7
Chek1O35280 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.68□□□□□ -0.7
Chek1O35280 Gm38225-201ENSMUST00000194001 393 ntBASIC10.68□□□□□ -0.7
Chek1O35280 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chek1O35280 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.68□□□□□ -0.7
Chek1O35280 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.68□□□□□ -0.7
Chek1O35280 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.68□□□□□ -0.7
Chek1O35280 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Chek1O35280 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Chek1O35280 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.68□□□□□ -0.7
Chek1O35280 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.68□□□□□ -0.7
Chek1O35280 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Chek1O35280 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chek1O35280 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.68□□□□□ -0.7
Chek1O35280 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.67□□□□□ -0.7
Chek1O35280 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Chek1O35280 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.67□□□□□ -0.7
Chek1O35280 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Chek1O35280 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Chek1O35280 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Chek1O35280 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Chek1O35280 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chek1O35280 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.67□□□□□ -0.7
Chek1O35280 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chek1O35280 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chek1O35280 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chek1O35280 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chek1O35280 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chek1O35280 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chek1O35280 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chek1O35280 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Chek1O35280 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.66□□□□□ -0.7
Chek1O35280 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chek1O35280 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chek1O35280 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.66□□□□□ -0.7
Chek1O35280 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Chek1O35280 Gm14140-201ENSMUST00000119999 995 ntBASIC10.66□□□□□ -0.7
Chek1O35280 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chek1O35280 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chek1O35280 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chek1O35280 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chek1O35280 Mir7221-201ENSMUST00000184009 72 ntBASIC10.66□□□□□ -0.7
Chek1O35280 Gm21362-201ENSMUST00000194272 928 ntBASIC10.66□□□□□ -0.7
Chek1O35280 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.66□□□□□ -0.7
Chek1O35280 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.66□□□□□ -0.7
Chek1O35280 Gm45841-201ENSMUST00000207700 164 ntBASIC10.66□□□□□ -0.7
Chek1O35280 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chek1O35280 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms