Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.68■□□□□ 0.26
Col15a1O35206 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Col15a1O35206 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col15a1O35206 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col15a1O35206 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Col15a1O35206 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 Gm20426-201ENSMUST00000173657 440 ntBASIC16.67■□□□□ 0.26
Col15a1O35206 Gm37666-201ENSMUST00000194110 866 ntBASIC16.67■□□□□ 0.26
Col15a1O35206 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.67■□□□□ 0.26
Col15a1O35206 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.67■□□□□ 0.26
Col15a1O35206 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.67■□□□□ 0.26
Col15a1O35206 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col15a1O35206 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.67■□□□□ 0.26
Col15a1O35206 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.67■□□□□ 0.26
Col15a1O35206 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col15a1O35206 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Col15a1O35206 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.66■□□□□ 0.26
Col15a1O35206 Gm11331-201ENSMUST00000119764 288 ntBASIC16.66■□□□□ 0.26
Col15a1O35206 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Col15a1O35206 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.66■□□□□ 0.26
Col15a1O35206 Gm39404-201ENSMUST00000216350 313 ntBASIC16.66■□□□□ 0.26
Col15a1O35206 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.66■□□□□ 0.26
Col15a1O35206 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col15a1O35206 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Col15a1O35206 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.65■□□□□ 0.26
Col15a1O35206 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.65■□□□□ 0.26
Col15a1O35206 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col15a1O35206 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Gm6963-201ENSMUST00000147879 379 ntBASIC16.65■□□□□ 0.26
Col15a1O35206 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.65■□□□□ 0.26
Col15a1O35206 Gm24749-201ENSMUST00000157838 343 ntBASIC16.65■□□□□ 0.26
Col15a1O35206 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col15a1O35206 Rprl1-202ENSMUST00000198476 238 ntBASIC16.65■□□□□ 0.26
Col15a1O35206 Gm44651-201ENSMUST00000207343 372 ntBASIC16.65■□□□□ 0.26
Col15a1O35206 Gm29787-201ENSMUST00000222129 849 ntBASIC16.65■□□□□ 0.26
Col15a1O35206 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.65■□□□□ 0.26
Col15a1O35206 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.65■□□□□ 0.26
Col15a1O35206 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col15a1O35206 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.65■□□□□ 0.26
Col15a1O35206 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Col15a1O35206 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Col15a1O35206 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Col15a1O35206 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Col15a1O35206 Gm12015-201ENSMUST00000117065 843 ntBASIC16.64■□□□□ 0.26
Col15a1O35206 Gm14999-201ENSMUST00000121039 624 ntBASIC16.64■□□□□ 0.26
Col15a1O35206 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.64■□□□□ 0.26
Col15a1O35206 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms