Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.75□□□□□ -0.53
Alx4O35137 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.75□□□□□ -0.53
Alx4O35137 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.75□□□□□ -0.53
Alx4O35137 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.75□□□□□ -0.53
Alx4O35137 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Alx4O35137 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.75□□□□□ -0.53
Alx4O35137 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Alx4O35137 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Alx4O35137 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Alx4O35137 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.74□□□□□ -0.53
Alx4O35137 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Alx4O35137 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.74□□□□□ -0.53
Alx4O35137 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.74□□□□□ -0.53
Alx4O35137 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.74□□□□□ -0.53
Alx4O35137 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.74□□□□□ -0.53
Alx4O35137 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.74□□□□□ -0.53
Alx4O35137 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.74□□□□□ -0.53
Alx4O35137 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Alx4O35137 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.74□□□□□ -0.53
Alx4O35137 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Alx4O35137 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Alx4O35137 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.74□□□□□ -0.53
Alx4O35137 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Alx4O35137 Gm12485-201ENSMUST00000119641 291 ntBASIC11.73□□□□□ -0.53
Alx4O35137 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.73□□□□□ -0.53
Alx4O35137 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Alx4O35137 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Gm27618-201ENSMUST00000183671 60 ntBASIC11.73□□□□□ -0.53
Alx4O35137 Gm27397-201ENSMUST00000184997 107 ntBASIC11.73□□□□□ -0.53
Alx4O35137 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.73□□□□□ -0.53
Alx4O35137 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.73□□□□□ -0.53
Alx4O35137 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.73□□□□□ -0.53
Alx4O35137 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.73□□□□□ -0.53
Alx4O35137 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Alx4O35137 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Alx4O35137 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Alx4O35137 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Alx4O35137 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Alx4O35137 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Alx4O35137 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Alx4O35137 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms