Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.98□□□□□ -0.49
Shisa8J3QNX5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gm15653-201ENSMUST00000119247 907 ntBASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Gm4804-201ENSMUST00000182234 999 ntBASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.98□□□□□ -0.49
Shisa8J3QNX5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Gm27622-201ENSMUST00000183779 60 ntBASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shisa8J3QNX5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms