Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Gm2383-201ENSMUST00000181461 807 ntBASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Gm13097-201ENSMUST00000210722 397 ntBASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm11236J3QMS7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Gm26461-201ENSMUST00000175064 290 ntBASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm11236J3QMS7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Gm12058-201ENSMUST00000118614 437 ntBASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.67□□□□□ -0.22
Gm11236J3QMS7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm11236J3QMS7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms