Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
C530025M09RikF6RGA8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
C530025M09RikF6RGA8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
C530025M09RikF6RGA8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
C530025M09RikF6RGA8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
C530025M09RikF6RGA8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gm9025-201ENSMUST00000122415 1575 ntBASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gm14701-201ENSMUST00000117156 348 ntBASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gm13453-201ENSMUST00000118708 357 ntBASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gm12485-201ENSMUST00000119641 291 ntBASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gm27702-201ENSMUST00000184512 56 ntBASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
C530025M09RikF6RGA8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Gm9522-201ENSMUST00000182394 926 ntBASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Gm43094-201ENSMUST00000196549 921 ntBASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC8.65□□□□□ -1.02
C530025M09RikF6RGA8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms