Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gm8738-201ENSMUST00000172606 329 ntBASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gm5781-201ENSMUST00000219792 443 ntBASIC13.71□□□□□ -0.21
Scn1aA2APX8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.71□□□□□ -0.21
Scn1aA2APX8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn1aA2APX8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.71□□□□□ -0.22
Scn1aA2APX8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.71□□□□□ -0.22
Scn1aA2APX8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Mir6420-201ENSMUST00000185032 102 ntBASIC13.71□□□□□ -0.22
Scn1aA2APX8 Gm42627-201ENSMUST00000197347 224 ntBASIC13.71□□□□□ -0.22
Scn1aA2APX8 Gm43758-201ENSMUST00000199500 367 ntBASIC13.71□□□□□ -0.22
Scn1aA2APX8 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.71□□□□□ -0.22
Scn1aA2APX8 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.71□□□□□ -0.22
Scn1aA2APX8 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.71□□□□□ -0.22
Scn1aA2APX8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scn1aA2APX8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.7□□□□□ -0.22
Scn1aA2APX8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.7□□□□□ -0.22
Scn1aA2APX8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.7□□□□□ -0.22
Scn1aA2APX8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn1aA2APX8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.69□□□□□ -0.22
Scn1aA2APX8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm18584-201ENSMUST00000203098 964 ntBASIC13.69□□□□□ -0.22
Scn1aA2APX8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm7046-201ENSMUST00000221351 977 ntBASIC13.69□□□□□ -0.22
Scn1aA2APX8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.69□□□□□ -0.22
Scn1aA2APX8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.69□□□□□ -0.22
Scn1aA2APX8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn1aA2APX8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms