Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Trav12d-1A0N8R0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav12d-1A0N8R0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Gm12485-201ENSMUST00000119641 291 ntBASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms