Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Gm12151-201ENSMUST00000121374 290 ntBASIC15.03■□□□□ -0
Ccdc112A0AUP1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.03■□□□□ -0
Ccdc112A0AUP1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Mir8102-201ENSMUST00000184148 139 ntBASIC15.03■□□□□ -0
Ccdc112A0AUP1 Gm28760-201ENSMUST00000185995 736 ntBASIC15.03■□□□□ -0
Ccdc112A0AUP1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.02■□□□□ -0
Ccdc112A0AUP1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Gm42550-201ENSMUST00000201553 960 ntBASIC15.02■□□□□ -0
Ccdc112A0AUP1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.02■□□□□ -0
Ccdc112A0AUP1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc112A0AUP1 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.02■□□□□ -0
Ccdc112A0AUP1 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.02■□□□□ -0
Ccdc112A0AUP1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.02■□□□□ -0
Ccdc112A0AUP1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.02□□□□□ -0.01
Ccdc112A0AUP1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Gm22189-201ENSMUST00000103822 86 ntBASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Gm6447-201ENSMUST00000118905 835 ntBASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Gm15321-201ENSMUST00000121290 288 ntBASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Gm26315-201ENSMUST00000083890 321 ntBASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms