Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn6Q9Z262 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Gm5687-201ENSMUST00000118252 640 ntBASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Gm12091-201ENSMUST00000146791 830 ntBASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn6Q9Z262 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn6Q9Z262 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn6Q9Z262 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn6Q9Z262 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn6Q9Z262 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn6Q9Z262 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn6Q9Z262 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn6Q9Z262 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Gm2495-201ENSMUST00000191160 466 ntBASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Cldn6Q9Z262 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Gm12928-201ENSMUST00000117115 573 ntBASIC12.32□□□□□ -0.44
Cldn6Q9Z262 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms