Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Smarcb1Q9Z0H3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm6023-201ENSMUST00000118217 606 ntBASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm22121-201ENSMUST00000175148 54 ntBASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm29396-201ENSMUST00000185659 716 ntBASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Olfr284-202ENSMUST00000206647 966 ntBASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Olfr582-201ENSMUST00000098212 960 ntBASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcb1Q9Z0H3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Gm9368-201ENSMUST00000219348 831 ntBASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcb1Q9Z0H3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms