Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cx3cr1Q9Z0D9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cx3cr1Q9Z0D9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cx3cr1Q9Z0D9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cx3cr1Q9Z0D9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cx3cr1Q9Z0D9 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.15□□□□□ -0.62
Cx3cr1Q9Z0D9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cx3cr1Q9Z0D9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cx3cr1Q9Z0D9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.15□□□□□ -0.63
Cx3cr1Q9Z0D9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.15□□□□□ -0.63
Cx3cr1Q9Z0D9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cx3cr1Q9Z0D9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Cx3cr1Q9Z0D9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm11779-201ENSMUST00000118541 368 ntBASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm46209-201ENSMUST00000217912 553 ntBASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cx3cr1Q9Z0D9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cx3cr1Q9Z0D9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms