Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Gm16177-201ENSMUST00000120728 718 ntBASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Gm13813-201ENSMUST00000120998 787 ntBASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubd1Q9R1K7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubd1Q9R1K7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubd1Q9R1K7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
Tubd1Q9R1K7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Tubd1Q9R1K7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubd1Q9R1K7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubd1Q9R1K7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Gm14921-201ENSMUST00000118643 908 ntBASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tubd1Q9R1K7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubd1Q9R1K7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubd1Q9R1K7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubd1Q9R1K7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubd1Q9R1K7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tubd1Q9R1K7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubd1Q9R1K7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.31□□□□□ -0.28
Tubd1Q9R1K7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.31□□□□□ -0.28
Tubd1Q9R1K7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms