Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a2Q9JLR1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Sec61a2Q9JLR1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Sec61a2Q9JLR1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sec61a2Q9JLR1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Gm18624-201ENSMUST00000220966 658 ntBASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a2Q9JLR1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Gm17330-201ENSMUST00000221047 165 ntBASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Gm6180-201ENSMUST00000065243 498 ntBASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a2Q9JLR1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms