Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 BC001981-202ENSMUST00000191393 1545 ntBASIC15.08■□□□□ 0.01
Ush1cQ9ES64 CT573086.2-201ENSMUST00000227277 4992 ntBASIC15.08■□□□□ 0
Ush1cQ9ES64 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ush1cQ9ES64 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ush1cQ9ES64 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.08■□□□□ 0
Ush1cQ9ES64 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ush1cQ9ES64 Gm5312-201ENSMUST00000203728 547 ntBASIC15.08■□□□□ 0
Ush1cQ9ES64 Gm18057-201ENSMUST00000208220 503 ntBASIC15.08■□□□□ 0
Ush1cQ9ES64 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.08■□□□□ 0
Ush1cQ9ES64 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.08■□□□□ 0
Ush1cQ9ES64 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.08■□□□□ 0
Ush1cQ9ES64 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ush1cQ9ES64 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ush1cQ9ES64 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ush1cQ9ES64 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ush1cQ9ES64 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ush1cQ9ES64 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ush1cQ9ES64 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ush1cQ9ES64 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ush1cQ9ES64 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ush1cQ9ES64 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ush1cQ9ES64 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.08■□□□□ 0
Ush1cQ9ES64 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ush1cQ9ES64 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.07■□□□□ 0
Ush1cQ9ES64 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.07■□□□□ 0
Ush1cQ9ES64 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ush1cQ9ES64 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.07■□□□□ 0
Ush1cQ9ES64 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.07■□□□□ 0
Ush1cQ9ES64 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 AA543401-201ENSMUST00000164248 1269 ntBASIC15.07■□□□□ 0
Ush1cQ9ES64 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.07■□□□□ 0
Ush1cQ9ES64 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.07■□□□□ 0
Ush1cQ9ES64 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.07■□□□□ 0
Ush1cQ9ES64 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.07■□□□□ 0
Ush1cQ9ES64 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.07■□□□□ 0
Ush1cQ9ES64 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.07■□□□□ 0
Ush1cQ9ES64 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ush1cQ9ES64 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.07■□□□□ 0
Ush1cQ9ES64 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ush1cQ9ES64 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.06■□□□□ 0
Ush1cQ9ES64 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ush1cQ9ES64 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm15920-201ENSMUST00000118998 402 ntBASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm13823-201ENSMUST00000119930 345 ntBASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm43474-201ENSMUST00000196415 774 ntBASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm43125-201ENSMUST00000201724 730 ntBASIC15.06■□□□□ 0
Ush1cQ9ES64 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms