Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm26185-201ENSMUST00000157692 266 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm27243-201ENSMUST00000183964 521 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm7783-201ENSMUST00000204795 781 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gm9368-201ENSMUST00000219348 831 ntBASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim54Q9ERP3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Gm29396-201ENSMUST00000185659 716 ntBASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Gm44364-201ENSMUST00000198368 141 ntBASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Gm43758-201ENSMUST00000199500 367 ntBASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Gm19163-201ENSMUST00000223313 780 ntBASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Cts7-204ENSMUST00000225321 1257 ntBASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.25□□□□□ -0.13
Trim54Q9ERP3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim54Q9ERP3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Acot6-202ENSMUST00000222921 3622 ntBASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Gm12363-201ENSMUST00000122250 668 ntBASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Gm7809-201ENSMUST00000153199 742 ntBASIC14.24□□□□□ -0.13
Trim54Q9ERP3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Gm38158-201ENSMUST00000194617 339 ntBASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Trim54Q9ERP3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms