Protein–RNA interactions for Protein: Q9ER65

Clstn2, Calsyntenin-2, mousemouse

Predictions only

Length 966 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn2Q9ER65 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clstn2Q9ER65 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Clstn2Q9ER65 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clstn2Q9ER65 Gm19221-201ENSMUST00000221827 1477 ntBASIC18.84■□□□□ 0.61
Clstn2Q9ER65 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clstn2Q9ER65 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clstn2Q9ER65 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clstn2Q9ER65 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clstn2Q9ER65 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clstn2Q9ER65 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clstn2Q9ER65 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clstn2Q9ER65 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clstn2Q9ER65 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clstn2Q9ER65 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Gm11531-201ENSMUST00000117614 555 ntBASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Gm18827-201ENSMUST00000188341 790 ntBASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Gm13097-201ENSMUST00000210722 397 ntBASIC18.83■□□□□ 0.6
Clstn2Q9ER65 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 AC154595.3-201ENSMUST00000224579 384 ntBASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Il17rd-203ENSMUST00000225146 3366 ntBASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clstn2Q9ER65 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Gm37737-201ENSMUST00000195013 1638 ntBASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Gm2383-201ENSMUST00000181461 807 ntBASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clstn2Q9ER65 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Gm12058-201ENSMUST00000118614 437 ntBASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Gm22058-201ENSMUST00000083393 310 ntBASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Gm10782-202ENSMUST00000223775 1480 ntBASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clstn2Q9ER65 Gm9025-201ENSMUST00000122415 1575 ntBASIC18.81■□□□□ 0.6
Clstn2Q9ER65 AC113060.1-201ENSMUST00000225689 1573 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms