Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Mir6392-201ENSMUST00000184924 108 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Gm10576-201ENSMUST00000191927 825 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cpne8Q9DC53 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Mir874-201ENSMUST00000104769 76 ntBASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Gm2495-201ENSMUST00000191160 466 ntBASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Gm19220-201ENSMUST00000222682 803 ntBASIC13.71□□□□□ -0.21
Cpne8Q9DC53 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cpne8Q9DC53 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpne8Q9DC53 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpne8Q9DC53 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cpne8Q9DC53 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cpne8Q9DC53 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.71□□□□□ -0.22
Cpne8Q9DC53 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpne8Q9DC53 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cpne8Q9DC53 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cpne8Q9DC53 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms