Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Gm20445-201ENSMUST00000061905 565 ntBASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc130Q9D516 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc130Q9D516 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc130Q9D516 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Gm18905-201ENSMUST00000205454 928 ntBASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Gm17795-201ENSMUST00000214505 757 ntBASIC13.26□□□□□ -0.29
Ccdc130Q9D516 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.26□□□□□ -0.29
Ccdc130Q9D516 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc130Q9D516 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms