Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Gm4857-201ENSMUST00000192718 785 ntBASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.66■□□□□ 0.1
Stag1Q9D3E6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Gm4986-201ENSMUST00000119731 549 ntBASIC15.65■□□□□ 0.1
Stag1Q9D3E6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Gm24548-201ENSMUST00000158650 108 ntBASIC15.65■□□□□ 0.1
Stag1Q9D3E6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Gm5781-201ENSMUST00000219792 443 ntBASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Stag1Q9D3E6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Stag1Q9D3E6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
Stag1Q9D3E6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Stag1Q9D3E6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Gm22323-201ENSMUST00000103832 109 ntBASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Gm37259-201ENSMUST00000193903 849 ntBASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Stag1Q9D3E6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms