Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Gm18624-201ENSMUST00000220966 658 ntBASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shmt2Q9CZN7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Gm11524-201ENSMUST00000119349 807 ntBASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Gm19078-201ENSMUST00000206311 727 ntBASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.59□□□□□ -0.39
Shmt2Q9CZN7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shmt2Q9CZN7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shmt2Q9CZN7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shmt2Q9CZN7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shmt2Q9CZN7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Shmt2Q9CZN7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Shmt2Q9CZN7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shmt2Q9CZN7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms