Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Gm38317-201ENSMUST00000195564 343 ntBASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Gm44967-201ENSMUST00000207047 631 ntBASIC16.32■□□□□ 0.2
Nip7Q9CXK8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Gm13097-201ENSMUST00000210722 397 ntBASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nip7Q9CXK8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Gm8099-201ENSMUST00000200510 742 ntBASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nip7Q9CXK8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Gm13875-201ENSMUST00000120162 282 ntBASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Gm2260-201ENSMUST00000184965 657 ntBASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nip7Q9CXK8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Daam2-202ENSMUST00000224595 1926 ntBASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Gm15276-201ENSMUST00000145953 498 ntBASIC16.29■□□□□ 0.2
Nip7Q9CXK8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nip7Q9CXK8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms