Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gm8927-201ENSMUST00000181978 981 ntBASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gm3222-201ENSMUST00000071282 990 ntBASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ddx28Q9CWT6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Gm6912-201ENSMUST00000117218 544 ntBASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Gm4875-201ENSMUST00000118257 786 ntBASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ddx28Q9CWT6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx28Q9CWT6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms