Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc3Q9CW03 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Smc3Q9CW03 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Smc3Q9CW03 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.48■□□□□ 0.07
Smc3Q9CW03 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.48■□□□□ 0.07
Smc3Q9CW03 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.48■□□□□ 0.07
Smc3Q9CW03 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smc3Q9CW03 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.47■□□□□ 0.07
Smc3Q9CW03 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.47■□□□□ 0.07
Smc3Q9CW03 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.47■□□□□ 0.07
Smc3Q9CW03 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.47■□□□□ 0.07
Smc3Q9CW03 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.47■□□□□ 0.07
Smc3Q9CW03 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.47■□□□□ 0.07
Smc3Q9CW03 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smc3Q9CW03 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.47■□□□□ 0.07
Smc3Q9CW03 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms