Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb1Q9CQ70 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Gm15371-201ENSMUST00000117057 784 ntBASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Gm19220-201ENSMUST00000222682 803 ntBASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Gm5867-201ENSMUST00000063197 592 ntBASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb1Q9CQ70 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.79□□□□□ -0.68
H2afb1Q9CQ70 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms