Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trim11Q99PQ2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.02□□□□□ -0.01
Trim11Q99PQ2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim11Q99PQ2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.01□□□□□ -0.01
Trim11Q99PQ2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.01□□□□□ -0.01
Trim11Q99PQ2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim11Q99PQ2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Trim11Q99PQ2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Gm44851-201ENSMUST00000205735 2309 ntBASIC15□□□□□ -0.01
Trim11Q99PQ2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Trim11Q99PQ2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim11Q99PQ2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trim11Q99PQ2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15□□□□□ -0.01
Trim11Q99PQ2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Trim11Q99PQ2 Mir6977-201ENSMUST00000184960 64 ntBASIC15□□□□□ -0.01
Trim11Q99PQ2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Gm6983-201ENSMUST00000214912 628 ntBASIC15□□□□□ -0.01
Trim11Q99PQ2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim11Q99PQ2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Trim11Q99PQ2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim11Q99PQ2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim11Q99PQ2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15□□□□□ -0.01
Trim11Q99PQ2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim11Q99PQ2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trim11Q99PQ2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Gm27437-201ENSMUST00000183429 107 ntBASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Mir7654-201ENSMUST00000185082 70 ntBASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Gm37917-201ENSMUST00000194711 392 ntBASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Gm44397-201ENSMUST00000195950 113 ntBASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms