Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Gm6888-201ENSMUST00000221983 706 ntBASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim8Q99PJ2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Gm12585-201ENSMUST00000117307 290 ntBASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim8Q99PJ2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm25144-201ENSMUST00000179561 110 ntBASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm25352-201ENSMUST00000179815 110 ntBASIC12.91□□□□□ -0.34
Trim8Q99PJ2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm20949-201ENSMUST00000206478 952 ntBASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms