Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rtn4rQ99PI8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gm12390-201ENSMUST00000117897 397 ntBASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gm8810-201ENSMUST00000172895 754 ntBASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gm24196-201ENSMUST00000179161 110 ntBASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gm27486-201ENSMUST00000184923 80 ntBASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gm6091-201ENSMUST00000098307 165 ntBASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rtn4rQ99PI8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Gm10156-201ENSMUST00000122364 462 ntBASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rtn4rQ99PI8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms