Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Gm38094-201ENSMUST00000195864 2978 ntBASIC17.22■□□□□ 0.35
Rtn4Q99P72 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC17.22■□□□□ 0.35
Rtn4Q99P72 Gm42734-201ENSMUST00000201656 878 ntBASIC17.22■□□□□ 0.35
Rtn4Q99P72 Gm44061-201ENSMUST00000203962 1195 ntBASIC17.22■□□□□ 0.35
Rtn4Q99P72 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4Q99P72 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.21■□□□□ 0.35
Rtn4Q99P72 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.21■□□□□ 0.35
Rtn4Q99P72 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Gm22094-201ENSMUST00000158976 117 ntBASIC17.21■□□□□ 0.35
Rtn4Q99P72 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Gm8927-201ENSMUST00000181978 981 ntBASIC17.21■□□□□ 0.35
Rtn4Q99P72 Gm27892-201ENSMUST00000185017 106 ntBASIC17.21■□□□□ 0.35
Rtn4Q99P72 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Gm19885-201ENSMUST00000212853 343 ntBASIC17.21■□□□□ 0.35
Rtn4Q99P72 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 AC158142.3-201ENSMUST00000226230 675 ntBASIC17.21■□□□□ 0.35
Rtn4Q99P72 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Gm3222-201ENSMUST00000071282 990 ntBASIC17.21■□□□□ 0.35
Rtn4Q99P72 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4Q99P72 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn4Q99P72 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.21■□□□□ 0.34
Rtn4Q99P72 AC151904.4-201ENSMUST00000219868 1319 ntBASIC17.21■□□□□ 0.34
Rtn4Q99P72 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Rtn4Q99P72 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms