Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.85□□□□□ -0.35
Msh4Q99MT2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.85□□□□□ -0.35
Msh4Q99MT2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.85□□□□□ -0.35
Msh4Q99MT2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msh4Q99MT2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.84□□□□□ -0.35
Msh4Q99MT2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.84□□□□□ -0.35
Msh4Q99MT2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.84□□□□□ -0.35
Msh4Q99MT2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Gm9002-201ENSMUST00000178437 499 ntBASIC12.84□□□□□ -0.35
Msh4Q99MT2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Msh4Q99MT2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Msh4Q99MT2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Msh4Q99MT2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Msh4Q99MT2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Msh4Q99MT2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Gm2495-201ENSMUST00000191160 466 ntBASIC12.83□□□□□ -0.36
Msh4Q99MT2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Gm5161-201ENSMUST00000075243 853 ntBASIC12.83□□□□□ -0.36
Msh4Q99MT2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.83□□□□□ -0.36
Msh4Q99MT2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Msh4Q99MT2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms