Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Gm22189-201ENSMUST00000103822 86 ntBASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Gm15770-201ENSMUST00000117498 584 ntBASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Gm7730-201ENSMUST00000212486 454 ntBASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Gm6218-201ENSMUST00000219812 628 ntBASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Gm42612-201ENSMUST00000197986 623 ntBASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Gm43170-201ENSMUST00000199827 612 ntBASIC12.78□□□□□ -0.36
Rnf111Q99ML9 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf111Q99ML9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf111Q99ML9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf111Q99ML9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Rnf111Q99ML9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf111Q99ML9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.77□□□□□ -0.36
Rnf111Q99ML9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf111Q99ML9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf111Q99ML9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Gm5279-201ENSMUST00000199575 745 ntBASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.77□□□□□ -0.37
Rnf111Q99ML9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.77□□□□□ -0.37
Rnf111Q99ML9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms