Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm8805-201ENSMUST00000117848 313 ntBASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm8062-201ENSMUST00000139696 444 ntBASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd3Q99LE3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Gm37424-201ENSMUST00000191727 561 ntBASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Gm45841-201ENSMUST00000207700 164 ntBASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd3Q99LE3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Gm43630-201ENSMUST00000201550 776 ntBASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.66□□□□□ -0.22
Lysmd3Q99LE3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms