Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.72□□□□□ -0.37
Rab28Q99KL7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.71□□□□□ -0.37
Rab28Q99KL7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.71□□□□□ -0.37
Rab28Q99KL7 Gm2231-201ENSMUST00000125661 612 ntBASIC12.71□□□□□ -0.37
Rab28Q99KL7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.71□□□□□ -0.37
Rab28Q99KL7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.71□□□□□ -0.37
Rab28Q99KL7 Gm43818-201ENSMUST00000200605 466 ntBASIC12.71□□□□□ -0.37
Rab28Q99KL7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.71□□□□□ -0.37
Rab28Q99KL7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Gm10146-201ENSMUST00000072739 309 ntBASIC12.71□□□□□ -0.37
Rab28Q99KL7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rab28Q99KL7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rab28Q99KL7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rab28Q99KL7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rab28Q99KL7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rab28Q99KL7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rab28Q99KL7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rab28Q99KL7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rab28Q99KL7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rab28Q99KL7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.7□□□□□ -0.38
Rab28Q99KL7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.7□□□□□ -0.38
Rab28Q99KL7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Gm18041-201ENSMUST00000218210 618 ntBASIC12.7□□□□□ -0.38
Rab28Q99KL7 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.7□□□□□ -0.38
Rab28Q99KL7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rab28Q99KL7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.69□□□□□ -0.38
Rab28Q99KL7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.69□□□□□ -0.38
Rab28Q99KL7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Gm11637-201ENSMUST00000120601 592 ntBASIC12.69□□□□□ -0.38
Rab28Q99KL7 Gm16177-201ENSMUST00000120728 718 ntBASIC12.69□□□□□ -0.38
Rab28Q99KL7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.69□□□□□ -0.38
Rab28Q99KL7 Gm45784-201ENSMUST00000188360 142 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms