Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.22■□□□□ 0.03
Smc1bQ920F6 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.22■□□□□ 0.03
Smc1bQ920F6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.21■□□□□ 0.03
Smc1bQ920F6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.21■□□□□ 0.03
Smc1bQ920F6 Olfr284-202ENSMUST00000206647 966 ntBASIC15.21■□□□□ 0.03
Smc1bQ920F6 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.21■□□□□ 0.03
Smc1bQ920F6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Snora73a-201ENSMUST00000082453 205 ntBASIC15.21■□□□□ 0.03
Smc1bQ920F6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.21■□□□□ 0.03
Smc1bQ920F6 Mir433-201ENSMUST00000093564 124 ntBASIC15.21■□□□□ 0.03
Smc1bQ920F6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc1bQ920F6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smc1bQ920F6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smc1bQ920F6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smc1bQ920F6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smc1bQ920F6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.2■□□□□ 0.02
Smc1bQ920F6 Gm12241-201ENSMUST00000118330 726 ntBASIC15.2■□□□□ 0.02
Smc1bQ920F6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.2■□□□□ 0.02
Smc1bQ920F6 Gm45865-201ENSMUST00000211815 945 ntBASIC15.2■□□□□ 0.02
Smc1bQ920F6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Gm5161-201ENSMUST00000075243 853 ntBASIC15.2■□□□□ 0.02
Smc1bQ920F6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smc1bQ920F6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smc1bQ920F6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms