Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha9Q91Y11 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gm13123-201ENSMUST00000122173 492 ntBASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gm24644-201ENSMUST00000157114 139 ntBASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gm29649-201ENSMUST00000185649 419 ntBASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gm28693-202ENSMUST00000190758 331 ntBASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gm6091-201ENSMUST00000098307 165 ntBASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdha9Q91Y11 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdha9Q91Y11 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Gm8805-201ENSMUST00000117848 313 ntBASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Gm17150-201ENSMUST00000165577 381 ntBASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Gm27331-201ENSMUST00000183705 60 ntBASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Gm8602-201ENSMUST00000184045 607 ntBASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdha9Q91Y11 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms