Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Gm13223-201ENSMUST00000118609 747 ntBASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Gm12882-201ENSMUST00000121696 517 ntBASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Gm27306-201ENSMUST00000183970 107 ntBASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb3Q91XZ7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb3Q91XZ7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Gm13453-201ENSMUST00000118708 357 ntBASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Gm28630-201ENSMUST00000187806 498 ntBASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Gm18766-201ENSMUST00000189811 808 ntBASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Gm8679-201ENSMUST00000210651 1036 ntBASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 AC132881.2-201ENSMUST00000225474 709 ntBASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb3Q91XZ7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb3Q91XZ7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms