Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Gm37466-201ENSMUST00000195692 652 ntBASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
Pcdhb5Q91XZ5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb5Q91XZ5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Pcdhb5Q91XZ5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb5Q91XZ5 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.46■□□□□ 0.06
Pcdhb5Q91XZ5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb5Q91XZ5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb5Q91XZ5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Gm18827-201ENSMUST00000188341 790 ntBASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Mir433-201ENSMUST00000093564 124 ntBASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb5Q91XZ5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Gm14726-201ENSMUST00000120623 896 ntBASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Mir7221-201ENSMUST00000184009 72 ntBASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb5Q91XZ5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms