Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.77□□□□□ -0.52
Pcdhga3Q91XY5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Syt7-205ENSMUST00000224135 1557 ntBASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Gm11524-201ENSMUST00000119349 807 ntBASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Gm27437-201ENSMUST00000183429 107 ntBASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Gm19078-201ENSMUST00000206311 727 ntBASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Gm6218-201ENSMUST00000219812 628 ntBASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Gm5161-201ENSMUST00000075243 853 ntBASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga3Q91XY5 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Gm18041-201ENSMUST00000218210 618 ntBASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga3Q91XY5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms